Geometric Applications of BSTs

COS 265 - Data Structures & Algorithms

overview

This lecture: intersections among geometric objects

Applications: CAD, games, movies, virtual reality, databases, GIS, ...

Efficient solutions: Binary search trees (and extensions)

overview

This lecture is only the tip of the iceberg!

See COS 350 and COS 424!

Geometric Applications of BSTs

1D range search

1d range search

Extension of ordered symbol table

Insert key-value pair
Search for key k
Delete key k
Range search: find all keys between k1 and k2
Range count: find number of keys between k1 and k2

Application: database queries

1d range search

insert B            B
insert D            B D
insert A            A B D
insert I            A B D I
insert H            A B D H I
insert F            A B D F H I
insert P            A B D F H I P
search G to K       H I
count  G to K       2

Geometric interpretation

Keys are points on a line
Find/count points in a given 1d interval

Quiz 1

Suppose that the keys are stored in a sorted array. What is the order of growth of the running time to perform range count as a function of $N$ and $R$, where $N$ is number of keys and $R$ is number of matching keys?

A. $\log R$

B. $\log N$

C. $\log N + R$

D. $N + R$

E. I don't know

1d range search: elementary impl

Ordered array: slow insert; fast range search

Unordered list: slow insert; slow range search

data structure	insert	range count	range search
ordered array	$N$	$\log N$	$R + \log N$
unordered list	$N$	$N$	$N$
goal	$\log N$	$\log N$	$R + \log N$

$N$ is number of keys; $R$ is number of keys that match

1d range count: BST implementation

1D range count: how many keys between lo and hi, inclusively?

public int size(Key lo, Key hi) {
    int rhi = rank(hi);
    int rlo = rank(lo);
    if(contains(hi))
        return rhi-rlo+1;
    else
        return rhi-rlo;
        // num of keys < hi
}

Proposition: running time proportional to $\log N$, assuming BST is balanced.

Pf: Nodes examined = search path to lo + search path to hi

1d range search: BST implementation

1D range search: find all keys between lo and hi

Recursively find all keys in left subtree if any could fall in range
Check key in current node
Recursively find all keys in right subtree if any could fall in range

1d range search: BST implementation

keys(E,Q) => {E, G, H, L, M, P}

1d range search: BST implementation

Proposition: running time proportional to $R + \log N$

Proof: Nodes examined = search path to lo + search path to hi + matches

1d range search: summary of performance

Ordered array: slow insert; fast range search

Unordered list: slow insert, slow range search

BST: fast insert, fast range search

data structure	insert	range count	range search
ordered array	$N$	$\log N$	$R + \log N$
unordered list	$N$	$N$	$N$
goal	$\log N$	$\log N$	$R + \log N$

$N$ is number of keys; $R$ is number of keys that match

Exercise: interval stabbing query

Goal: Insert intervals (left,right) and support queries of the form "how many intervals contain x?"

Geometric applications of bsts

line segment intersection

orthogonal line segment intersection

Given $N$ horizontal and vertical line segments, find all intersections

Quadratic algorithm: Check all pairs of line segments for intersections

microprocessors and geometry

Early 1970s: microprocessor design became a geometric problem

Very Large Scale Integration (VLSI)
Computer-Aided Design (CAD)

Design-rule checking

Certain wires cannot intersect
Certain spacing needed between different types of wires
Debugging = line segment (or rectangle) intersection

algorithms and moore's law

Moore's law (1965): Transistor count doubles every 2 years

Sustaining Moore's law

problem size doubles every 2 years (problem size = transistor count)
processing power doubles every 2 years (get to use faster computer)
How much $ do I need to get the job done with a quadratic algorithm?

Running time today: $T_N = a N^2$
Running time in 2 years: $T_{2N} = (a/2)(2N)^2 = 2T_N$

Sustaining Moore's law

running time	1970	1972	1974	2000
$N$	$ $x$	$ $x$	$ $x$	$ $x$
$N \log N$	$ $x$	= $ $x$	= $ $x$	= $ $x$
$N^2$	$ $x$	$ $2x$	$ $4x$	$ $2^nx$

where $n = 15$

Bottom line: Linearithmic algorithm is necessary to sustain Moore's law

orthogonal line segment intersection: sweep-line algorithm

Nondegeneracy assumption: All x- and y- coordinates are distinct

orthogonal line segment intersection: sweep-line algorithm

Sweep vertical line from left to right

x-coordinates define events
h-segment (left endpoint): insert y-coordinate into BST
h-segment (right endpoint): remove y-coordinate from BST
v-segment: range search for interval of y-endpoints

orthogonal line segment intersection: sweep-line algorithm

Sweep vertical line from left to right

x-coordinates define events
h-segment (left endpoint): insert y-coordinate into BST
h-segment (right endpoint): remove y-coordinate from BST
v-segment: range search for interval of y-endpoints

orthogonal line segment intersection: sweep-line algorithm

Sweep vertical line from left to right

x-coordinates define events
h-segment (left endpoint): insert y-coordinate into BST
h-segment (right endpoint): remove y-coordinate from BST
v-segment: range search for interval of y-endpoints

orthogonal line segment intersection: sweep-line algorithm

Proposition: the sweep-line algorithm takes time proportional to $N \log N + R$ to find all $R$ intersections among $N$ orthogonal line segments

Proof:

Put x-coordinate on a PQ (or sort) ($N \log N$)
Insert y-coordinate into BST ($N \log N$)
Delete y-coordinate from BST ($N \log N$)
Range searches is BST $N \log N + R$

Bottom line: sweep line reduces 2D orthogonal line segment intersection search to 1D range search

sweep-line algorithm: context

The sweep-line algorithm is a key technique in computation geometry

Geometric intersection

General line segment intersection
Axis-aligned rectangle intersection
...

sweep-line algorithm: context

geometric applications of bsts

$k$-d trees

2D orthogonal range search

Extension of ordered symbol-table to 2D keys

Insert a 2D key
Search for a 2D key
Delete a 2D key
Range search: find all keys that lie in a 2D range
Range count: number of keys that lie in a 2D range

Applications: Networking, circuit design, databases, ...

2D orthogonal range search

Geometric interpretation

Keys are points in the plane
Find/count points in a given h-v rectangle (axis-aligned)

2D ortho search: grid implementation

Grid implementation

Divide space into $M$-by-$M$ grid of squares
Create list of points contained in each square
Use 2D array to directly index relevant square
Insert: add (x,y) to list for corresponding square
Range search: examine only squares that intersect 2D range query

2D ortho search: grid impl. analysis

Space-time tradeoff

Space: $M^2 + N$
Time: $1 + N / M^2$ per square examined, on average

Choose grid square size to tune performance

Too small: wastes space
Too large: too many points per square
General rule: $\sqrt{N}$-by-$\sqrt{N}$ grid

2D ortho search: grid impl. analysis

Running time (if points are evenly distributed)

Choose $M \texttilde \sqrt{N}$
Initialize data structure: $N$
Insert point: $1$
Range search: $1$ per point in range

clustering

grid implementation: fast, simple solution for evenly-distributed points

Problem: Clustering is a well-known phenomenon in geometric data

Lists are too long, even though average length is short
Need data structure that adapts gracefully to data

clustering

grid implementation: fast, simple solution for evenly-distributed points

Problem: Clustering is a well-known phenomenon in geometric data

Example: USA Map data

13,000 points, 1000 grid squares: half the squares are empty, and half the points are in 10% of the squares

space-partitioning trees

Use a tree to represent a recursive subdivision of 2D space

Grid: divide space uniformly into squares
Quadtree: recursively divide space into four quadrants
2D tree: recursively divide space into two axis-aligned halfplanes
BSP tree: recursively divide space into two arbitrary halfplanes

space-partitioning trees: applications

Applications

Ray tracing
2D range search
Flight simulators
N-body simulation
Collision detection
Astronomical databases
Nearest neighbor search

Adaptive mesh generation
Acceleration rendering in Doom
Hidden surface removal and shadow casting

2d tree construction

Recursively partition plane into two halfplanes

2d tree implementation

Data structure: BST, but alternate using $x$- and $y$-coordinate as key

Search gives rectangle containing point
Insert further subdivides the plane

quiz 2

Where would point 11 be inserted in the $k$-d tree below?

A. Right child of F
B. Left child of G
C. Left child of J
D. Right child of J
E. I don't know

quiz 2

Where would point 11 be inserted in the $k$-d tree below?

A. Right child of F
B. Left child of G
C. Left child of J
D. Right child of J
E. I don't know

F is LR node, so right = right
G is LR node, so left = left
J is UD node, so left = below
J is UD node, so right = above

2d tree demo: range search

Goal: Find all points in a query axis-aligned rectangle

Check if point in node lies in given rectangle
Recursively search left/bottom if any could fall in rectangle
Recursively search right-top if any could fall in rectangle

range search in a 2d tree analysis

Typical case: $R + \log N$

Worst case (assuming tree is balanced): $R + \sqrt{n}$

2d tree demo: nearest neighbor

Goal: Find closest point to query point

Check distance from point in node to query point
Recursively search left/bottom if it could contain a closer point
Recursively search right/top if it could contain a closer point
Organize method so that it begins by searching for query point

Quiz 3

Which of the following is the worst case for nearest neighbor search?

D. I don't know

nn search in a 2d tree analysis

Typical case: $\log N$

Worst case (even if tree is balanced): $N$

$k$-d tree

$k$-d tree: Recursively partition $k$-dimensional space into 2 halfspaces

Implementation: BST, but cycle through dimensions as in 2D trees

$k$-d tree

Efficient, simple data structure for processing $k$-dimensional data

Widely used
Adapts well to high-dimensional and clustered data
Discovered by an undergrad in an algorithms class

flocking birds

Q. What "natural algorithm" do starlings, migrating geese, cranes, bait balls of fish, and flashing fireflies use to flock?

flocking boids (craig reynolds, 1986)

Boids: 3 simple rules lead to complex emergent flocking behavior:

Collision avoidance: point away from $k$-nearest boids
Flock centering: point towards center mass of $k$-nearest boids
Velocity matching: update velocity to avg of $k$-nearest boids

$N$-body simulation

Goal: simulate motion of $N$ particles, mutually affected by gravity

Brute force: for each pair of particles, compute force: $F = \frac{Gm_1m_2}{r^2}$

Running time: time per step is $N^2$

appel's algorithm for $N$-body simulation

Key idea: Suppose particle is far, far away from cluster of particles

Treat cluster of particles as a single aggregate particle
Compute force between particle and center of mass of aggregate

appel's algorithm for $N$-body simulation

Build 3D tree with $N$ particles as nodes
Store center-of-mass of subtree in each node
To compute total force acting on a particle, traverse tree, but stop as soon as distance from particle to subdivision is sufficiently large

Impact: running time per step is $N \log N$, enabling new research!